Publications

Publications produced by researchers at the Centre for Image Analysis are listed below.

Most Recent Publications

• Towards automatic protein co-expression quantification in immunohistochemical TMA slides. Leslie Solorzano, Carla Pereira, Diana Martins, Raquel Almeida, Fatima Carneiro, Gabriela Almeida, Carla Oliveira, and Carolina Wählby. In IEEE journal of biomedical and health informatics, volume 25, number 2, pp 393-402, 2021. (DOI, Fulltext, TissUUmaps publications, fulltext:postprint, fulltext:print).
• Cross-modal Representation Learning for Efficient Registration of Multiphoton and Brightfield Microscopy Images of Skin Tissue. Elisabeth Wetzer, Nicolas Pielawski, Johan Öfverstedt, Lu Jiahao, Joakim Lindblad, A. Dumitru, M. Costache, R. Hristu, S.G. Stanciu, and Natasa Sladoje. In 4th NEUBIAS Conference, Bordeaux, France, 2020.
• BIAFLOWS: A Collaborative Framework to Reproducibly Deploy and Benchmark Bioimage Analysis Workflows.. Ulysse Rubens, Romain Mormont, Lassi Paavolainen, Volker Bäcker, Benjamin Pavie, Leandro A Scholz, Gino Michiels, Martin Maška, Devrim Ünay, Graeme Ball, Renaud Hoyoux, Rémy Vandaele, Ofra Golani, Stefan G Stanciu, Natasa Sladoje, Perrine Paul-Gilloteaux, Raphaël Marée, and Sébastien Tosi. In Patterns (New York, N.Y.), volume 1, number 3, 2020. (DOI).
• A Deep Learning Based Pipeline for Efficient Oral Cancer Screening on Whole Slide Images. Jiahao Lu, Natasa Sladoje, Christina Runow Stark, Eva Darai Ramqvist, Jan-Michaél Hirsch, and Joakim Lindblad. In Image Analysis and Recognition, Lecture Notes in Computer Science - LNCS 12132, pp 249-261, pp 249-261, Springer International Publishing, 2020. (DOI).
• CoMIR: Contrastive Multimodal Image Representation for Registration. Nicolas Pielawski, Elisabeth Wetzer, Johan Öfverstedt, Jiahao Lu, Carolina Wählby, Joakim Lindblad, and Natasa Sladoje. In NeurIPS - 34th Conference on Neural Information Processing Systems, 2020.
• Bootstrapping Weakly Supervised Segmentation-free Word Spotting through HMM-based Alignment. Tomas Wilkinson and Carl Nettelblad. In 2020 17th International Conference on Frontiers in Handwriting Recognition (ICFHR), pp 49-54, Uppsala, 2020. (DOI).
• INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration. Johan Öfverstedt, Joakim Lindblad, and Natasa Sladoje. 2020. (External link).
• Two Polynomial Time Graph Labeling Algorithms Optimizing Max-Norm-Based Objective Functions. Filip Malmberg and Krzysztof Chris Ciesielski Ciesielski. In Journal of Mathematical Imaging and Vision, volume 62, number 5, pp 737-750, 2020. (DOI).
• A fast instance selection method for support vector machines in building extraction. Mohammad Aslani and Stefan Seipel. In Applied Soft Computing, volume 97, 2020. (DOI, Fulltext, fulltext:print).
• Assessing Damage – Can the Crowd Interpret Colour and 3D Information?. Gaëlle Seffers, Juia Åhlén, Stefan Seipel, and Kristien Ooms. In Cartographic Journal, volume 0, pp 1-14, 2020. (DOI).

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• Publications 2000 and onward (Coming)
• Publications 1988 - 1999 (Coming)